Constructing and sampling directed graphs with given degree sequences

It appeared recently that the classical random graph model used to represent real-world complex networks does not capture their main properties. Since then, various attempts have been made to provide accurate models. We study here a model which achieves the following challenges: it produces graphs which have the three main wanted properties (clustering, degree distribution, average distance), it is based on some real-world observations, and it is sufficiently simple to make i...

We propose algorithms for construction and random generation of hypergraphs without loops and with prescribed degree and dimension sequences. The objective is to provide a starting point for as well as an alternative to Markov chain Monte Carlo approaches. Our algorithms leverage the transposition of properties and algorithms devised for matrices constituted of zeros and ones with prescribed row- and column-sums to hypergraphs. The construction algorithm extends the applicabi...

We study the problem of generating connected random graphs with no self-loops or multiple edges and that, in addition, have a given degree sequence. The generation method we focus on is the edge-switching Markov-chain method, whose functioning depends on a parameter w related to the method's core operation of an edge switch. We analyze two existing heuristics for adjusting w during the generation of a graph and show that they result in a Markov chain whose stationary distribu...

We introduce and study a class of exchangeable random graph ensembles. They can be used as statistical null models for empirical networks, and as a tool for theoretical investigations. We provide general theorems that carachterize the degree distribution of the ensemble graphs, together with some features that are important for applications, such as subgraph distributions and kernel of the adjacency matrix. These results are used to compare to other models of simple and compl...

With the current burst of network theory (especially in connection with social and biological networks) there is a renewed interest on realizations of given degree sequences. In this paper we propose an essentially new degree sequence problem: we want to find graphical realizations of a given degree sequence on labeled vertices, where certain would-be edges are {\em forbidden}. Then we want to sample uniformly and efficiently all these possible realizations. (This problem can...

In this paper we consider the optimization problem of generating graphs with a prescribed degree distribution, such that the correlation between the degrees of connected nodes, as measured by Spearman's rho, is minimal. We provide an algorithm for solving this problem and obtain a complete characterization of the joint degree distribution in these maximally disassortative graphs, in terms of the size-biased degree distribution. As a result we get a lower bound for Spearman's ...

Transcription networks, and other directed networks can be characterized by some topological observables such as for example subgraph occurrence (network motifs). In order to perform such kind of analysis, it is necessary to be able to generate suitable randomized network ensembles. Typically, one considers null networks with the same degree sequences of the original ones. The commonly used algorithms sometimes have long convergence times, and sampling problems. We present he...

Because of the huge number of graphs possible even with a small number of nodes, inference on network structure is known to be a challenging problem. Generating large random directed graphs with prescribed probabilities of occurrences of some meaningful patterns (motifs) is also difficult. We show how to generate such random graphs according to a formal probabilistic representation, using fast Markov chain Monte Carlo methods to sample them. As an illustration, we generate re...

We study the statistical properties of the generation of random graphs according the configuration model, where one assigns randomly degrees to nodes. This model is often used, e.g., for the scale-free degree distribution ~d^gamma. For the efficient variant, where non-feasible edges are rejected and the construction of a graph continues, there exists a bias, which we calculate explicitly for a small sample ensemble. We find that this bias does not disappear with growing syste...

Although asymptotic analyses of undirected network models based on degree sequences have started to appear in recent literature, it remains an open problem to study statistical properties of directed network models. In this paper, we provide for the first time a rigorous analysis of directed exponential random graph models using the in-degrees and out-degrees as sufficient statistics with binary as well as continuous weighted edges. We establish the uniform consistency and th...