Resolution of ranking hierarchies in directed networks

The statistical inference of stochastic block models as emerged as a mathematicaly principled method for identifying communities inside networks. Its objective is to find the node partition and the block-to-block adjacency matrix of maximum likelihood i.e. the one which has most probably generated the observed network. In practice, in the so-called microcanonical ensemble, it is frequently assumed that when comparing two models which have the same number and sizes of communit...

Spectral clustering is a fast and popular algorithm for finding clusters in networks. Recently, Chaudhuri et al. (2012) and Amini et al.(2012) proposed inspired variations on the algorithm that artificially inflate the node degrees for improved statistical performance. The current paper extends the previous statistical estimation results to the more canonical spectral clustering algorithm in a way that removes any assumption on the minimum degree and provides guidance on the ...

Hierarchical graph clustering is a common technique to reveal the multi-scale structure of complex networks. We propose a novel metric for assessing the quality of a hierarchical clustering. This metric reflects the ability to reconstruct the graph from the dendrogram, which encodes the hierarchy. The optimal representation of the graph defines a class of reducible linkages leading to regular dendrograms by greedy agglomerative clustering.

Hypergraphs are a natural modeling paradigm for a wide range of complex relational systems. A standard analysis task is to identify clusters of closely related or densely interconnected nodes. Many graph algorithms for this task are based on variants of the stochastic blockmodel, a random graph with flexible cluster structure. However, there are few models and algorithms for hypergraph clustering. Here, we propose a Poisson degree-corrected hypergraph stochastic blockmodel (D...

We present an efficient algorithm for the inference of stochastic block models in large networks. The algorithm can be used as an optimized Markov chain Monte Carlo (MCMC) method, with a fast mixing time and a much reduced susceptibility to getting trapped in metastable states, or as a greedy agglomerative heuristic, with an almost linear $O(N\ln^2N)$ complexity, where $N$ is the number of nodes in the network, independent on the number of blocks being inferred. We show that ...

We consider Gallai's graph Modular Decomposition theory for network analytics. On the one hand, by arguing that this is a choice tool for understanding structural and functional similarities among nodes in a network. On the other, by proposing a model for random graphs based on this decomposition. Our approach establishes a well defined context for hierarchical modeling and provides a solid theoretical framework for probabilistic and statistical methods. Theoretical and simul...

We propose a nonparametric framework for the analysis of networks, based on a natural limit object termed a graphon. We prove consistency of graphon estimation under general conditions, giving rates which include the important practical setting of sparse networks. Our results cover dense and sparse stochastic blockmodels with a growing number of classes, under model misspecification. We use profile likelihood methods, and connect our results to approximation theory, nonparame...

We propose a general framework for modelling network data that is designed to describe aspects of non-exchangeable networks. Conditional on latent (unobserved) variables, the edges of the network are generated by their finite growth history (with latent orders) while the marginal probabilities of the adjacency matrix are modeled by a generalization of a graph limit function (or a graphon). In particular, we study the estimation, clustering and degree behavior of the network i...

Directed networks such as gene regulation networks and neural networks are connected by arcs (directed links). The nodes in a directed network are often strongly interwound by a huge number of directed cycles, which lead to complex information-processing dynamics in the network and make it highly challenging to infer the intrinsic direction of information flow. In this theoretical paper, based on the principle of minimum-feedback, we explore the node hierarchy of directed net...

A growing number of systems are represented as networks whose architecture conveys significant information and determines many of their properties. Examples of network architecture include modular, bipartite, and core-periphery structures. However inferring the network structure is a non trivial task and can depend sometimes on the chosen null model. Here we propose a method for classifying network structures and ranking its nodes in a statistically well-grounded fashion. The...