July 18, 2017
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October 15, 2018
Numerous networks, such as transportation, distribution and delivery networks optimize their designs in order to increase efficiency and lower costs, improving the stability of its intended functions, etc. Networks that distribute goods, such as electricity, water, gas, telephone and data (Internet), or services as mail, railways and roads are examples of transportation networks. The optimal design fixes network architecture, including clustering, degree distribution, hierarc...
November 29, 2023
We provide new results on the structure of optimal transportation networks obtained as minimizers of an energy cost functional consisting of a kinetic (pumping) and material (metabolic) cost terms, constrained by a local mass conservation law. In particular, we prove that every tree (i.e., graph without loops) represents a local minimizer of the energy with concave metabolic cost. For the linear metabolic cost, we prove that the set of minimizers contains a loop-free structur...
November 1, 2017
Transport networks are crucial to the functioning of natural and technological systems. Nature features transport networks that are adaptive over a vast range of parameters, thus providing an impressive level of robustness in supply. Theoretical and experimental studies have found that real-world transport networks exhibit both tree-like motifs and cycles. When the network is subject to load fluctuations, the presence of cyclic motifs may help to reduce flow fluctuations and,...
July 24, 2015
The origin of allometric scaling patterns that are multiples of 1/4 has long fascinated biologists. While not universal, scaling relationships with exponents that are close to multiples of 1/4 are common and have been described in all major clades. Foremost among these relationships is the 3/4 scaling of metabolism with mass which underpins the 1/4 power dependence of biological rates and times. Several models have been advanced to explain the underlying mechanistic drivers o...
January 10, 2019
The plant hormone auxin controls many aspects of the development of plants. One striking dynamical feature is the self-organisation of leaf venation patterns which is driven by high levels of auxin within vein cells. The auxin transport is mediated by specialised membrane-localised proteins. Many venation models have been based on polarly localised efflux-mediator proteins of the PIN family. Here, we investigate a modeling framework for auxin transport with a positive feedbac...
October 23, 2018
Transport networks are crucial to the functioning of natural systems and technological infrastructures. For flow networks in many scenarios, such as rivers or blood vessels, acyclic networks (i.e., trees) are optimal structures when assuming time-independent in- and outflow. Dropping this assumption, fluctuations of net flow at source and/or sink nodes may render the pure tree solutions unstable even under a simple local adaptation rule for conductances. Here, we consider tre...
July 27, 2020
Many foraging microorganisms rely upon cellular transport networks to deliver nutrients, fluid and organelles between different parts of the organism. Networked organisms ranging from filamentous fungi to slime molds demonstrate a remarkable ability to mix or disperse molecules and organelles in their transport media. Here we introduce mathematical tools to analyze the structure of energy efficient transport networks that maximize mixing and sending signals originating from a...
March 11, 2019
Branching in vascular networks and in overall organismic form is one of the most common and ancient features of multicellular plants, fungi, and animals. By combining machine-learning techniques with new theory that relates vascular form to metabolic function, we enable novel classification of diverse branching networks--mouse lung, human head and torso, angiosperm and gymnosperm plants. We find that ratios of limb radii--which dictate essential biologic functions related to ...
February 25, 2021
Transport networks are typically optimized, either by evolutionary pressures in biological systems or by human design in engineered structures. In the case of systems such as the animal vasculature, the transport of fluids is hindered by the inherent viscous resistance to flow while being kept in a dynamic state by the pulsatile nature of the heart and elastic properties of the vessel walls. While this imparted pulsatility necessarily increases the dissipation of energy cause...
May 6, 2014
We build an evolutionary scenario that explains how some crucial physiological constraints in the arterial network of mammals - i.e. hematocrit, vessels diameters and arterial pressure drops - could have been selected by evolution. We propose that the arterial network evolved while being constrained by its function as an organ. To support this hypothesis, we focus our study on one of the main function of blood network: oxygen supply to the organs. We consider an idealized org...