February 2, 2015
We call a cusped hyperbolic 3-manifold tetrahedral if it can be decomposed into regular ideal tetrahedra. Following an earlier publication by three of the authors, we give a census of all tetrahedral manifolds and all of their combinatorial tetrahedral tessellations with at most 25 (orientable case) and 21 (non-orientable case) tetrahedra. Our isometry classification uses certified canonical cell decompositions (based on work by Dunfield, Hoffman, Licata) and isomorphism sign...
November 18, 2010
It is important to have fast and effective methods for simplifying 3-manifold triangulations without losing any topological information. In theory this is difficult: we might need to make a triangulation super-exponentially more complex before we can make it smaller than its original size. Here we present experimental work suggesting that for 3-sphere triangulations the reality is far different: we never need to add more than two tetrahedra, and we never need more than a hand...
May 24, 2013
In this work we present a complete (no misses, no duplicates) census for closed, connected, orientable and prime 3-manifolds induced by plane graphs with a bipartition of its edge set (blinks) up to $k=9$ edges. Blinks form a universal encoding for such manifolds. In fact, each such a manifold is a subtle class of blinks, \cite{lins2013B}. Blinks are in 1-1 correpondence with {\em blackboard framed links}, \cite {kauffman1991knots, kauffman1994tlr} We hope that this census be...
August 13, 2012
Regina is a software package for studying 3-manifold triangulations and normal surfaces. It includes a graphical user interface and Python bindings, and also supports angle structures, census enumeration, combinatorial recognition of triangulations, and high-level functions such as 3-sphere recognition, unknot recognition and connected sum decomposition. This paper brings 3-manifold topologists up-to-date with Regina as it appears today, and documents for the first time in ...
February 6, 2020
This survey focuses on the computational complexity of some of the fundamental decision problems in 3-manifold theory. The article discusses the wide variety of tools that are used to tackle these problems, including normal and almost surfaces, hierarchies, homomorphisms to finite groups, and hyperbolic structures.
November 24, 2016
Many scientific fields study data with an underlying structure that is a non-Euclidean space. Some examples include social networks in computational social sciences, sensor networks in communications, functional networks in brain imaging, regulatory networks in genetics, and meshed surfaces in computer graphics. In many applications, such geometric data are large and complex (in the case of social networks, on the scale of billions), and are natural targets for machine learni...
August 31, 2018
We show how, given a sufficiently large point cloud sampled from an embedded 2-manifold in $\mathbb{R}^n$, we may obtain a global representation as a cell complex with vertices given by a representative subset of the point cloud. The vertex spacing is based on obtaining an approximation of the tangent plane which insures that the vertex accurately summarizes the local data. Using results from topological graph theory, we couple our cell complex representation with the known C...
August 15, 2024
We give an overview of combinatorial methods to represent 3D data, such as graphs and meshes, from the viewpoint of their amenability to analysis using machine learning algorithms. We highlight pros and cons of various representations and we discuss some methods of generating/switching between the representations. We finally present two concrete applications in life science and industry. Despite its theoretical nature, our discussion is in general motivated by, and biased tow...
December 20, 2022
The neural manifold hypothesis postulates that the activity of a neural population forms a low-dimensional manifold whose structure reflects that of the encoded task variables. In this work, we combine topological deep generative models and extrinsic Riemannian geometry to introduce a novel approach for studying the structure of neural manifolds. This approach (i) computes an explicit parameterization of the manifolds and (ii) estimates their local extrinsic curvature--hence ...
June 18, 2022
This paper presents the computational challenge on differential geometry and topology that was hosted within the ICLR 2022 workshop ``Geometric and Topological Representation Learning". The competition asked participants to provide implementations of machine learning algorithms on manifolds that would respect the API of the open-source software Geomstats (manifold part) and Scikit-Learn (machine learning part) or PyTorch. The challenge attracted seven teams in its two month d...