ID: cond-mat/0503086

Dynamics of membranes driven by actin polymerization

March 4, 2005

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Modelling cellular spreading and emergence of motility in the presence of curved membrane proteins and active cytoskeleton forces

January 1, 2021

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Raj Kumar Sadhu, Samo Penič, ... , Gov Nir S.
Biological Physics
Soft Condensed Matter
Cell Behavior

Eukaryotic cells adhere to extracellular matrix during the normal development of the organism, forming static adhesion as well as during cell motility. We study this process by considering a simplified coarse-grained model of a vesicle that has uniform adhesion energy with a flat substrate, mobile curved membrane proteins and active forces. We find that a high concentration of curved proteins alone increases the spreading of the vesicle, by the self-organization of the curved...

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Active interface growth and pattern formation in membrane-protein systems

December 15, 2017

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F. Cagnetta, M. R. Evans, D. Marenduzzo
Soft Condensed Matter
Statistical Mechanics
Biological Physics

Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that the coupling between interfacial and inclusions dynam- ics yields microphase separation and the self-organisation of travelling waves. These patterns are strikingly similar to those detected in the aforementioned experiments on actin-protein...

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Filopodia rotate and coil by actively generating twist in their actin shaft

November 25, 2021

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Natascha Leijnse, Younes Farhangi Barooji, Mohammad Reza Arastoo, Stine Lauritzen Sønder, Bram Verhagen, Lena Wullkopf, Janine Terra Erler, Szabolcs Semsey, Jesper Nylandsted, Lene Broeng Oddershede, ... , Bendix Poul Martin
Biological Physics
Soft Condensed Matter

Filopodia are actin-rich structures, present on the surface of practically every known eukaryotic cell. These structures play a pivotal role in specific cell-cell and cell-matrix interactions by allowing cells to explore their environment, generate mechanical forces, perform chemical signaling, or convey signals via intercellular tunneling nano-bridges. The dynamics of filopodia appear quite complex as they exhibit a rich behavior of buckling, pulling, length and shape change...

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Modelling the effect of myosin X motors on filopodia growth

December 16, 2013

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Katrin Wolff, Conrad Barrett-Freeman, Martin R. Evans, ... , Marenduzzo Davide
Biological Physics
Soft Condensed Matter
Subcellular Processes

We present a numerical simulation study of the dynamics of filopodial growth in the presence of active transport by myosin X motors. We employ both a microscopic agent-based model, which captures the stochasticity of the growth process, and a continuum mean-field theory which neglects fluctuations. We show that in the absence of motors, filopodia growth is overestimated by the continuum mean-field theory. Thus fluctuations slow down the growth, especially when the protrusions...

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Transverse fluctuations control the assembly of semiflexible filaments

March 6, 2023

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Valerio Sorichetti, Martin Lenz
Soft Condensed Matter
Materials Science
Statistical Mechanics
Biological Physics

The kinetics of the assembly of semiflexible filaments through end-to-end annealing is key to the structure of the cytoskeleton, but is not understood. We analyze this problem through scaling theory and simulations, and uncover a regime where filaments ends find each other through bending fluctuations without the need for the whole filament to diffuse. This results in a very substantial speed-up of assembly in physiological regimes, and could help understand the dynamics of a...

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Dynamics of a membrane coupled to an active fluid

December 12, 2019

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Chia-Chun Liang, Kento Yasuda, Shigeyuki Komura, ... , Chen Hsuan-Yi
Soft Condensed Matter
Biological Physics

The dynamics of a membrane coupled to an active fluid on top of a substrate is considered theoretically. It is assumed that the director field of the active fluid has rotational symmetry in the membrane plane. This situation is likely to be relevant for in vitro reconstructed actomyosin-membrane system. Different from a membrane coupled to a polar active fluid, this model predicts that only when the viscosity of the fluid above the membrane is sufficiently large, a contractil...

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Reaction-Diffusion Waves Coupled with Membrane Curvature

April 13, 2021

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Naoki Tamemoto, Hiroshi Noguchi
Soft Condensed Matter
Biological Physics

The reaction-diffusion waves of proteins are known to be involved in fundamental cellular functions, such as cell migration, cell division, and vesicular transportation. In some of these phenomena, pattern formation on the membranes is induced by the coupling between membrane deformation and the reaction-diffusion system through curvature-inducing proteins that bend the biological membranes. Although the membrane shape and the dynamics of the curvature-inducing proteins affec...

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Coiling of cellular protrusions around extracellular fibers

May 25, 2022

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Raj Kumar Sadhu, Christian Hernandez-Padilla, Yael Eshed Eisenbach, Lixia Zhang, Harshad D Vishwasrao, Bahareh Behkam, Hari Shroff, Aleš Iglič, Elior Peles, ... , Gov Nir S
Biological Physics
Soft Condensed Matter

Protrusions at the leading-edge of a cell play an important role in sensing the extracellular cues, during cellular spreading and motility. Recent studies provided indications that these protrusions wrap (coil) around the extra-cellular fibers. The details of this coiling process, and the mechanisms that drive it, are not well understood. We present a combined theoretical and experimental study of the coiling of cellular protrusions on fibers of different geometry. Our theore...

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Mechanics and polarity in cell motility

March 31, 2016

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Davide Ambrosi, Anna Zanzottera
Cell Behavior

The motility of a fish keratocyte on a flat substrate exhibits two distinct regimes: the non-migrating and the migrating one. In both configurations the shape is fixed in time and, when the cell is moving, the velocity is constant in magnitude and direction. Transition from a stable configuration to the other one can be produced by a mechanical or chemotactic perturbation. In order to point out the mechanical nature of such a bistable behaviour, we focus on the actin dynamics...

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Theoretical study of vesicle shapes driven by coupling curved proteins and active cytoskeletal forces

December 3, 2018

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Miha Fošnarič, Samo Penič, Aleš Iglič, Veronika Kralj-Iglič, ... , Gov Nir
Biological Physics
Soft Condensed Matter

Eukaryote cells have a flexible shape, which dynamically changes according to the function performed by the cell. One mechanism for deforming the cell membrane into the desired shape is through the expression of curved membrane proteins. Furthermore, these curved membrane proteins are often associated with the recruitment of the cytoskeleton, which then applies active forces that deform the membrane. This coupling between curvature and activity was previously explored theoret...

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