Structural Inference of Hierarchies in Networks

Community detection is one of the most important problems in network analysis. Among many algorithms proposed for this task, methods based on statistical inference are of particular interest: they are mathematically sound and were shown to provide partitions of good quality. Statistical inference methods are based on fitting some random graph model (a.k.a. null model) to the observed network by maximizing the likelihood. The choice of this model is extremely important and is ...

Complex systems are often characterized by distinct types of interactions between the same entities. These can be described as a multilayer network where each layer represents one type of interaction. These layers may be interdependent in complicated ways, revealing different kinds of structure in the network. In this work we present a generative model, and an efficient expectation-maximization algorithm, which allows us to perform inference tasks such as community detection ...

Researchers theorize that many real-world networks exhibit community structure where within-community edges are more likely than between-community edges. While numerous methods exist to cluster nodes into different communities, less work has addressed this question: given some network, does it exhibit statistically meaningful community structure? We answer this question in a principled manner by framing it as a statistical hypothesis test in terms of a general and model-agnos...

Complex real-world networks commonly reveal characteristic groups of nodes like communities and modules. These are of value in various applications, especially in the case of large social and information networks. However, while numerous community detection techniques have been presented in the literature, approaches for other groups of nodes are relatively rare and often limited in some way. We present a simple propagation-based algorithm for general group detection that req...

Networks have become a key approach to understanding systems of interacting objects, unifying the study of diverse phenomena including biological organisms and human society. One crucial step when studying the structure and dynamics of networks is to identify communities: groups of related nodes that correspond to functional subunits such as protein complexes or social spheres. Communities in networks often overlap such that nodes simultaneously belong to several groups. Mean...

In this work, we propose a Bayesian statistical model to simultaneously characterize two or more social networks defined over a common set of actors. The key feature of the model is a hierarchical prior distribution that allows us to represent the entire system jointly, achieving a compromise between dependent and independent networks. Among others things, such a specification easily allows us to visualize multilayer network data in a low-dimensional Euclidean space, generate...

Modularity is a popular measure of community structure. However, maximizing the modularity can lead to many competing partitions, with almost the same modularity, that are poorly correlated with each other. It can also produce illusory "communities" in random graphs where none exist. We address this problem by using the modularity as a Hamiltonian at finite temperature, and using an efficient Belief Propagation algorithm to obtain the consensus of many partitions with high mo...

Hierarchy seems to pervade complexity in both living and artificial systems. Despite its relevance, no general theory that captures all features of hierarchy and its origins has been proposed yet. Here we present a formal approach resulting from the convergence of theoretical morphology and network theory that allows constructing a 3D morphospace of hierarchies and hence comparing the hierarchical organization of ecological, cellular, technological and social networks. Embedd...

An efficient and relatively fast algorithm for the detection of communities in complex networks is introduced. The method exploits spectral properties of the graph Laplacian-matrix combined with hierarchical-clustering techniques, and includes a procedure to maximize the ``modularity'' of the output. Its performance is compared with that of other existing methods, as applied to different well-known instances of complex networks with a community-structure: both computer-genera...

In recent years, the theory and application of complex networks have been quickly developing in a markable way due to the increasing amount of data from real systems and to the fruitful application of powerful methods used in statistical physics. Many important characteristics of social or biological systems can be described by the study of their underlying structure of interactions. Hierarchy is one of these features that can be formulated in the language of networks. In thi...