July 6, 2010
We consider a model recently proposed by Chatterjee and Durrett [CD2011] as an "annealed approximation" of boolean networks, which are a class of cellular automata on a random graph, as defined by S. Kauffman [K69]. The starting point is a random directed graph on $n$ vertices; each vertex has $r$ input vertices pointing to it. For the model of [CD2011], a discrete time threshold contact process is then considered on this graph: at each instant, each vertex has probability $q...
December 19, 2003
We propose a simple model that aims at describing, in a stylized manner, how local breakdowns due unbalances or congestion propagate in real dynamical networks. The model converges to a self-organized critical stationary state in which the network shapes itself as a consequence of avalanches of rewiring processes. Depending on the model's specification, we obtain either single scale or scale-free networks. We characterize in detail the relation between the statistical propert...
February 1, 2001
We study both numerically and analytically what happens to a random graph of average connectivity "alpha" when its leaves and their neighbors are removed iteratively up to the point when no leaf remains. The remnant is made of isolated vertices plus an induced subgraph we call the "core". In the thermodynamic limit of an infinite random graph, we compute analytically the dynamics of leaf removal, the number of isolated vertices and the number of vertices and edges in the core...
March 18, 2005
Zero-range processes, in which particles hop between sites on a lattice, are closely related to equilibrium networks, in which rewiring of links take place. Both systems exhibit a condensation transition for appropriate choices of the dynamical rules. The transition results in a macroscopically occupied site for zero-range processes and a macroscopically connected node for networks. Criticality, characterized by a scale-free distribution, is obtained only at the transition po...
December 27, 2012
We study a neural network model of interacting stochastic discrete two--state cellular automata on a regular lattice. The system is externally tuned to a critical point which varies with the degree of stochasticity (or the effective temperature). There are avalanches of neuronal activity, namely spatially and temporally contiguous sites of activity; a detailed numerical study of these activity avalanches is presented, and single, joint and marginal probability distributions a...
April 21, 2011
We study information processing in populations of Boolean networks with evolving connectivity and systematically explore the interplay between the learning capability, robustness, the network topology, and the task complexity. We solve a long-standing open question and find computationally that, for large system sizes $N$, adaptive information processing drives the networks to a critical connectivity $K_{c}=2$. For finite size networks, the connectivity approaches the critica...
November 15, 2007
The growth in number and nature of dynamical attractors in Kauffman NK network models are still not well understood properties of these important random boolean networks. Structural circuits in the underpinning graph give insights into the number and length distribution of attractors in the NK model. We use a fast direct circuit enumeration algorithm to study the NK model and determine the growth behaviour of structural circuits. This leads to an explanation and lower bound o...
August 15, 2012
The exponential family of random graphs is one of the most promising class of network models. Dependence between the random edges is defined through certain finite subgraphs, analogous to the use of potential energy to provide dependence between particle states in a grand canonical ensemble of statistical physics. By adjusting the specific values of these subgraph densities, one can analyze the influence of various local features on the global structure of the network. Loosel...
January 2, 2011
We analyze critical phenomena on networks generated as the union of hidden variables models (networks with any desired degree sequence) with arbitrary graphs. The resulting networks are general small-worlds similar to those a` la Watts and Strogatz but with a heterogeneous degree distribution. We prove that the critical behavior (thermal or percolative) remains completely unchanged by the presence of finite loops (or finite clustering). Then, we show that, in large but finite...
March 14, 2014
Using Boolean networks as prototypical examples, the role of symmetry in the dynamics of heterogeneous complex systems is explored. We show that symmetry of the dynamics, especially in critical states, is a controlling feature that can be used both to greatly simplify analysis and to characterize different types of dynamics. Symmetry in Boolean networks is found by determining the frequency at which the various Boolean output functions occur. There are classes of functions th...